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- Splice variants
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Gene: scro FBgn0287186

Description

scarecrow

Gene Synonyms

Location

Primary_assembly 3L: 24,724,162-24,758,036 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 62 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
scro-RA	FBtr0113751	1961	468aa	FBpp0112474	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7PL95 Q9NCG1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
scro-RC	FBtr0113752	1874	439aa	FBpp0112475	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8Y525	-	-
scro-RF	FBtr0339923	1492	307aa	FBpp0308955	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8Y527	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
scro-RB	FBtr0113750	1246	293aa	FBpp0112473	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BI77	-	-

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Gene: scro FBgn0287186

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Gene: scro FBgn0287186

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