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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: tra2 FBgn0003742

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Description

transformer 2

Gene Synonyms

Location

Primary_assembly 2R: 14,602,004-14,604,337 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 7 transcripts (splice variants) and 38 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
tra2-RG	FBtr0089621	1391	264aa	FBpp0088946	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19018	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
tra2-RC	FBtr0089619	1568	226aa	FBpp0088564	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
tra2-RE	FBtr0089616	1460	179aa	FBpp0088561	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
tra2-RB	FBtr0089618	1405	136aa	FBpp0088563	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
tra2-RF	FBtr0089620	1381	264aa	FBpp0088947	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19018	-	-
tra2-RA	FBtr0089617	1376	264aa	FBpp0088562	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19018	-	-
tra2-RD	FBtr0089615	1228	226aa	FBpp0088560	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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