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- Splice variants
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DB built by FlyBase

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Gene: Pxd FBgn0004577

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Description

Peroxidase

Gene Synonyms

Location

Primary_assembly 3R: 17,014,576-17,027,987 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 57 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pxd-RA	FBtr0089287	2558	690aa	FBpp0088343	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DMS3 E1JIN0 Q01603	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Pxd-RC	FBtr0337061	2552	688aa	FBpp0307990	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHM9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Pxd-RB	FBtr0301526	2231	690aa	FBpp0290741	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIN0 Q01603	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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