Summary
- Splice variants
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DB built by FlyBase

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Gene: stnB FBgn0016975

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Description

stoned B

Gene Synonyms

Location

Primary_assembly X: 22,980,722-23,004,648 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 131 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
stnB-RG	FBtr0344111	8332	1262aa	FBpp0310530	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24212 X2JGF5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
stnB-RE	FBtr0302020	8270	1262aa	FBpp0291230	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24212 X2JGF5	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
stnB-RH	FBtr0344466	8207	1241aa	FBpp0310837	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JCY4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
stnB-RF	FBtr0302021	8144	1262aa	FBpp0291231	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24212 X2JGF5	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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