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- Splice variants
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DB built by FlyBase

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Gene: CG5004 FBgn0260748

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Gene Synonyms

Location

Primary_assembly X: 17,107,582-17,135,988 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 6 transcripts (splice variants), 12 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5004-RA	FBtr0074386	5088	1247aa	FBpp0074160	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHD5 Q9VX80	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5004-RC	FBtr0302376	4573	1147aa	FBpp0291571	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSQ1	-	-
CG5004-RB	FBtr0302375	4563	1147aa	FBpp0291570	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSQ1	-	-
CG5004-RF	FBtr0346797	2075	221aa	FBpp0312375	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S0X119	-	-
CG5004-RD	FBtr0302377	1967	328aa	FBpp0291572	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F3YDC5 M9MSF4	-	-
CG5004-RE	FBtr0343201	1800	277aa	FBpp0309890	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JFU3	-	-

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Summary

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