Description
squash
Gene Synonyms
Location
Primary_assembly 2L: 16,680,054-16,681,653 forward strand.
BDGP6.46:AE014134.6
About this gene
This gene has 3 transcripts (splice variants), 5 orthologues and 1 paralogue.
Transcripts
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squash
Primary_assembly 2L: 16,680,054-16,681,653 forward strand.
BDGP6.46:AE014134.6
This gene has 3 transcripts (splice variants), 5 orthologues and 1 paralogue.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
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squ-RA | FBtr0080887 | 1372 | 241aa | FBpp0099829 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | L0CPL1 L0CPT7 L0CQV7 L0CQW1 L0CRB3 L0CRL1 L0CRL5 L0CRL9 L0CRM7 Q7KT57 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
squ-RC | FBtr0335140 | 1171 | 241aa | FBpp0307139 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KT57 | - | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
squ-RB | FBtr0305565 | 1029 | 241aa | FBpp0294016 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KT57 | - | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
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Ensembl Metazoa release 58 - January 2024 © EMBL-EBI EMBL-EBI
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