Summary
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DB built by FlyBase

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Gene: Col4a1 FBgn0000299

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Description

Collagen type IV alpha 1

Location

Primary_assembly 2L: 5,029,609-5,037,279 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 97 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Col4a1-RB	FBtr0079002	6101	1779aa	FBpp0078641	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P08120	NM_164615.2 NM_164616 NM_164616.2 NM_164617.2 NP_723044.1 NP_723045 NP_723045.1 NP_723046.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Col4a1-RA	FBtr0079003	6000	1779aa	FBpp0078642	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7FNQ3 P08120	NM_164615 NM_164615.2 NM_164616.2 NM_164617.2 NP_723044 NP_723044.1 NP_723045.1 NP_723046.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Col4a1-RC	FBtr0079001	5635	1779aa	FBpp0078640	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P08120	NM_164615.2 NM_164616.2 NM_164617 NM_164617.2 NP_723044.1 NP_723045.1 NP_723046 NP_723046.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays