Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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Genetic Variation
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DB built by FlyBase

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Gene: chic FBgn0000308

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Description

chickadee

Gene Synonyms

Location

Primary_assembly 2L: 5,972,115-5,981,018 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 6 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
chic-RD	FBtr0079236	2091	126aa	FBpp0089196	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEU5 P25843	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
chic-RC	FBtr0079234	1513	126aa	FBpp0078865	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEU5 P25843	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
chic-RB	FBtr0079235	1402	126aa	FBpp0078866	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEU5 P25843	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
chic-RF	FBtr0309213	1275	126aa	FBpp0301152	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEU5 P25843	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
chic-RA	FBtr0079233	1005	126aa	FBpp0078864	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEU5 P25843	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
chic-RE	FBtr0309212	988	126aa	FBpp0301151	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEU5 P25843	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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