Summary
- Splice variants
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DB built by FlyBase

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Gene: dec-1 FBgn0000427

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Description

defective chorion 1

Gene Synonyms

Location

Primary_assembly X: 7,867,161-7,873,222 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 6 transcripts (splice variants) and 4 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
dec-1-RA	FBtr0071145	5696	1590aa	FBpp0071097	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P18171	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
dec-1-RG	FBtr0310269	5683	1573aa	FBpp0301952	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NG31	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
dec-1-RC	FBtr0071147	3751	950aa	FBpp0071099	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3PFE0 P18170	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
dec-1-RB	FBtr0071146	3737	1208aa	FBpp0071098	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P18169	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
dec-1-RE	FBtr0309795	3686	1191aa	FBpp0301548	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEA7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
dec-1-RF	FBtr0309796	3612	960aa	FBpp0301549	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEY9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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