Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: ec FBgn0000542

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Description

echinus

Location

Primary_assembly X: 3,811,698-3,857,621 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 96 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ec-RB	FBtr0112801	6863	1746aa	FBpp0111713	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1W9Q0 Q6IIR9	NM_130722 NM_130722.4 NP_570078 NP_570078.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
ec-RA	FBtr0070606	6759	1712aa	FBpp0100019	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O77283 Q6IIR8	NM_166992 NM_166992.3 NP_726893 NP_726893.2
ec-RC	FBtr0112802	6681	1765aa	FBpp0111714	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1W9P9 Q7K7E6	NM_001103407 NM_001103407.3 NP_001096877 NP_001096877.1

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Summary

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Gene-based displays