Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: gd FBgn0000808

.

Description

gastrulation-defective

Location

Primary_assembly X: 11,985,154-11,987,764 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 72 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
gd-RF	FBtr0347416	2234	528aa	FBpp0312566	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J5Z6 F6J5Z9 F6J606 F6J607 F6J629 F6J632	NM_001272549.1 NM_001316623 NM_001316623.1 NP_001259478.1 NP_001303552 NP_001303552.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
gd-RE	FBtr0332310	1932	179aa	FBpp0304589	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J5Y8	NM_001272551 NM_001272551.1 NP_001259480 NP_001259480.1
gd-RD	FBtr0332309	1923	531aa	FBpp0304588	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J600 F6J613 F6J621 F6J627 F6J634 O62589	NM_001272549.1 NM_001272550 NM_001272550.1 NM_001272551.1 NM_001316623.1 NP_001259478.1 NP_001259479 NP_001259479.1 NP_001259480.1 NP_001303552.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
gd-RC	FBtr0332308	1914	528aa	FBpp0304587	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_001272549 NM_001272549.1 NM_001316623.1 NP_001259478 NP_001259478.1 NP_001303552.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

.

Summary

.

.

Gene-based displays