Summary
- Splice variants
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Sequence
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DB built by FlyBase

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Gene: Mlc1 FBgn0002772

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Description

Myosin alkali light chain 1

Gene Synonyms

Location

Primary_assembly 3R: 27,657,078-27,660,177 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 115 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Mlc1-RD	FBtr0344131	1414	155aa	FBpp0310544	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHS1 P06742	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Mlc1-RB	FBtr0085196	929	155aa	FBpp0084566	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHS1 D6W4L2 E6PBY9 P06742	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Mlc1-RA	FBtr0085195	882	155aa	FBpp0084565	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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