Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: pnt FBgn0003118

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Description

pointed

Gene Synonyms

Location

Primary_assembly 3R: 23,290,231-23,346,167 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 154 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
pnt-RB	FBtr0089717	4074	718aa	FBpp0088658	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P51023	NM_001275943.1 NM_079737 NM_079737.3 NM_170070.2 NM_170651.4 NP_001262872.1 NP_524461 NP_524461.2 NP_732857.1 NP_732858.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
pnt-RE	FBtr0334554	3715	625aa	FBpp0306621	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KH96 N0D853	NM_001275943 NM_001275943.1 NP_001262872 NP_001262872.1	-
pnt-RC	FBtr0089715	2996	623aa	FBpp0088656	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P51022	NM_170070 NM_170070.2 NP_732858 NP_732858.1	-
pnt-RD	FBtr0089716	2805	636aa	FBpp0088657	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H8F4R1	NM_170651 NM_170651.4 NP_732857 NP_732857.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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