Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: pum FBgn0003165

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Description

pumilio

Location

Primary_assembly 3R: 9,066,343-9,237,682 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 8 transcripts (splice variants) and 84 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
pum-RG	FBtr0333667	10223	1533aa	FBpp0305823	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFF0 P25822	NM_001275474 NM_001275474.1 NM_079561.4 NM_169258.3 NM_169259.3 NM_169260.4 NM_176427.3 NP_001262403 NP_001262403.1 NP_524285.2 NP_731314.1 NP_731315.1 NP_731316.2 NP_788604.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
pum-RH	FBtr0333668	8057	921aa	FBpp0305824	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFX7	NM_001275475 NM_001275475.1 NP_001262404 NP_001262404.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
pum-RB	FBtr0081993	7473	1185aa	FBpp0081473	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A075BI71 A0A075BIA6 A0A075BJE8 A0A075BJF4 A0A075BJN8 A0A075BJP0 A0A075BJY4 A0A075BLU8 A0A075BLV2 A0A075BLV4	NM_169260 NM_169260.4 NP_731316 NP_731316.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
pum-RC	FBtr0081992	6809	1533aa	FBpp0081472	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A075BI55 A0A075BJ98 A0A075BJA1 A0A075BJE1 A0A075BJG6 A0A075BJW8 A0A075BLT6 A0A0B4KFF0 P25822	NM_001275474.1 NM_079561 NM_079561.4 NM_169258.3 NM_169259.3 NM_169260.4 NM_176427.3 NP_001262403.1 NP_524285 NP_524285.2 NP_731314.1 NP_731315.1 NP_731316.2 NP_788604.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
pum-RA	FBtr0081990	6661	1533aa	FBpp0081470	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFF0 P25822	NM_001275474.1 NM_079561.4 NM_169258 NM_169258.3 NM_169259.3 NM_169260.4 NM_176427.3 NP_001262403.1 NP_524285.2 NP_731314 NP_731314.1 NP_731315.1 NP_731316.2 NP_788604.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
pum-RD	FBtr0081991	6659	1533aa	FBpp0081471	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFF0 P25822	NM_001275474.1 NM_079561.4 NM_169258.3 NM_169259 NM_169259.3 NM_169260.4 NM_176427.3 NP_001262403.1 NP_524285.2 NP_731314.1 NP_731315 NP_731315.1 NP_731316.2 NP_788604.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
pum-RE	FBtr0081994	4685	935aa	FBpp0081474	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_176427 NM_176427.3 NP_788604 NP_788604.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
pum-RF	FBtr0305197	4655	925aa	FBpp0293727	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K612	NM_001260073 NM_001260073.2 NP_001247002 NP_001247002.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays