Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: rst FBgn0003285

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Description

roughest

Location

Primary_assembly X: 2,950,399-2,973,834 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 2 transcripts (splice variants), 100 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
rst-RB	FBtr0343758	6251	764aa	FBpp0310320	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08180 X2JCF8	NM_001297906 NM_001297906.1 NM_080319.5 NP_001284835 NP_001284835.1 NP_525058.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
rst-RA	FBtr0070562	4818	764aa	FBpp0070537	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08180 X2JCF8	NM_001297906.1 NM_080319 NM_080319.5 NP_001284835.1 NP_525058 NP_525058.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays