Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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Pan-taxonomic Compara
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- Orthologues
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DB built by FlyBase

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Gene: sn FBgn0003447

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Description

singed

Location

Primary_assembly X: 7,964,024-7,986,601 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants) and 119 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
sn-RB	FBtr0071102	3358	512aa	FBpp0071058	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V441 Q24524	NM_001169226.2 NM_078521.3 NM_167142.3 NM_167143 NM_167143.3 NP_001162697.1 NP_511076.3 NP_727226.1 NP_727227 NP_727227.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
sn-RA	FBtr0071101	3101	512aa	FBpp0071057	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V441 Q24524 Q8SY66	NM_001169226.2 NM_078521.3 NM_167142 NM_167142.3 NM_167143.3 NP_001162697.1 NP_511076.3 NP_727226 NP_727226.1 NP_727227.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
sn-RE	FBtr0301677	2451	512aa	FBpp0290891	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V441 Q24524	NM_001169226 NM_001169226.2 NM_078521.3 NM_167142.3 NM_167143.3 NP_001162697 NP_001162697.1 NP_511076.3 NP_727226.1 NP_727227.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
sn-RG	FBtr0301679	2322	512aa	FBpp0290893	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V441 Q24524	NM_001169226.2 NM_078521 NM_078521.3 NM_167142.3 NM_167143.3 NP_001162697.1 NP_511076 NP_511076.3 NP_727226.1 NP_727227.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays