Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: sn FBgn0003447

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Description

singed

Gene Synonyms

Location

Primary_assembly X: 7,964,024-7,986,601 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants) and 186 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
sn-RB	FBtr0071102	3358	512aa	FBpp0071058	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V441 Q24524	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
sn-RA	FBtr0071101	3101	512aa	FBpp0071057	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V441 Q24524 Q8SY66	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
sn-RE	FBtr0301677	2451	512aa	FBpp0290891	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V441 Q24524	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
sn-RG	FBtr0301679	2322	512aa	FBpp0290893	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V441 Q24524	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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