Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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- Structural variants
Gene expression
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External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: spo FBgn0003486

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Description

spook

Gene Synonyms

Location

Primary_assembly 3L: 5,590,083-5,592,571 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 77 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
spo-RC	FBtr0346640	2489	543aa	FBpp0312220	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H8F4V5 Q9VRM7	NM_001300014 NM_001300014.1 NM_139718.3 NP_001286943 NP_001286943.1 NP_647975.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
spo-RA	FBtr0077130	2187	543aa	FBpp0076836	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H8F4V5 Q9VRM7	NM_001300014.1 NM_139718 NM_139718.3 NP_001286943.1 NP_647975 NP_647975.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays