Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: sr FBgn0003499

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Description

stripe

Location

Primary_assembly 3R: 18,090,803-18,135,583 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 5 transcripts (splice variants) and 8 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
sr-RE	FBtr0344633	6377	906aa	FBpp0310950	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24163 Q7JP26 Q8IN91	NM_001300455 NM_001300455.1 NM_169786.3 NP_001287384 NP_001287384.1 NP_732289.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
sr-RA	FBtr0083542	5757	1186aa	FBpp0082966	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VED3	NM_079671 NM_079671.2 NP_524395 NP_524395.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
sr-RD	FBtr0330050	5757	1271aa	FBpp0303083	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGW2 Q24163 Q7JP26	NM_001275764 NM_001275764.1 NP_001262693 NP_001262693.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
sr-RB	FBtr0083543	4543	906aa	FBpp0082967	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IN91	NM_001300455.1 NM_169786 NM_169786.3 NP_001287384.1 NP_732289 NP_732289.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
sr-RC	FBtr0301615	3976	717aa	FBpp0290830	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIP0 Q6AWP1	NM_001170172 NM_001170172.2 NP_001163643 NP_001163643.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays