Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: sqh FBgn0003514

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Location

Chromosome X: 6,223,061-6,225,140 reverse strand.

BDGP6.28:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 127 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0339503	1403	174aa	FBpp0308587	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J1D0 P40423	NM_001297999.1 NM_001298000.1 NM_001298001.1 NM_001298002.1 NM_078502.3 NP_001284928.1 NP_001284929.1 NP_001284930.1 NP_001284931.1 NP_511057.1
-	FBtr0070877	1117	174aa	FBpp0070842	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J1D0 P40423	NM_001297999.1 NM_001298000.1 NM_001298001.1 NM_001298002.1 NM_078502.3 NP_001284928.1 NP_001284929.1 NP_001284930.1 NP_001284931.1 NP_511057.1
-	FBtr0339504	1097	174aa	FBpp0308588	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J1D0 P40423	NM_001297999.1 NM_001298000.1 NM_001298001.1 NM_001298002.1 NM_078502.3 NP_001284928.1 NP_001284929.1 NP_001284930.1 NP_001284931.1 NP_511057.1
-	FBtr0339502	1093	174aa	FBpp0308586	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J1D0 P40423	NM_001297999.1 NM_001298000.1 NM_001298001.1 NM_001298002.1 NM_078502.3 NP_001284928.1 NP_001284929.1 NP_001284930.1 NP_001284931.1 NP_511057.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0345294	1024	174aa	FBpp0311461	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J1D0 P40423	NM_001297999.1 NM_001298000.1 NM_001298001.1 NM_001298002.1 NM_078502.3 NP_001284928.1 NP_001284929.1 NP_001284930.1 NP_001284931.1 NP_511057.1

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Summary

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Gene-based displays