Suppressor of variegation 2-10
Primary_assembly 2R: 9,116,122-9,122,000 forward strand.
BDGP6.32:AE013599.5
This gene has 14 transcripts (splice variants), 164 orthologues and 1 paralogue.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
Su(var)2-10-RI | FBtr0088570 | 2402 | 640aa | FBpp0087651 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z7P5 | NM_165645 NM_165645.2 NP_724749 NP_724749.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
Su(var)2-10-RH | FBtr0088571 | 2943 | 569aa | FBpp0087652 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z7P7 | NM_165647 NM_165647.3 NP_724751 NP_724751.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RE | FBtr0088576 | 2847 | 522aa | FBpp0087657 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9XYM5 | NM_165652 NM_165652.3 NP_724756 NP_724756.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RG | FBtr0088575 | 2632 | 604aa | FBpp0087656 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z7P8 | NM_165648 NM_165648.3 NP_724752 NP_724752.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RK | FBtr0302506 | 2632 | 537aa | FBpp0291668 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4JCQ7 | NM_001201958 NM_001201958.2 NP_001188887 NP_001188887.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RF | FBtr0088574 | 2548 | 533aa | FBpp0087655 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5BIG7 | NM_165650 NM_165650.3 NP_724754 NP_724754.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RN | FBtr0343996 | 2414 | 577aa | FBpp0310445 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4LEH9 | NM_001299299 NM_001299299.1 NP_001286228 NP_001286228.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RC | FBtr0088573 | 2389 | 565aa | FBpp0087654 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z7P9 | NM_165649 NM_165649.2 NP_724753 NP_724753.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RB | FBtr0088577 | 2306 | 593aa | FBpp0087658 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z7Q1 | NM_165651 NM_165651.2 NP_724755 NP_724755.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RD | FBtr0088572 | 2159 | 601aa | FBpp0087653 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IGK3 | NM_165646 NM_165646.2 NP_724750 NP_724750.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RL | FBtr0302507 | 2150 | 584aa | FBpp0291669 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4JD33 C0PDF2 C1C3E9 | NM_001201959 NM_001201959.2 NP_001188888 NP_001188888.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RM | FBtr0306705 | 2149 | 570aa | FBpp0297644 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K6T9 | NM_001259286 NM_001259286.2 NP_001246215 NP_001246215.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RA | FBtr0088578 | 2063 | 554aa | FBpp0087659 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KNF5 | NM_078940 NM_078940.3 NP_523664 NP_523664.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Su(var)2-10-RJ | FBtr0302505 | 2054 | 537aa | FBpp0291667 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4JD03 | NM_001201957 NM_001201957.2 NP_001188886 NP_001188886.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |