Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: tup FBgn0003896

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Description

tailup

Gene Synonyms

Location

Primary_assembly 2L: 18,859,507-18,881,261 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 158 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
tup-RA	FBtr0081111	3251	534aa	FBpp0080661	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P92031 Q9VJ37	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
tup-RB	FBtr0081112	3314	465aa	FBpp0080662	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9Y0Z9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tup-RC	FBtr0342921	2270	534aa	FBpp0309708	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJ37	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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