midgut expression 1
Primary_assembly 3L: 15,517,424-15,519,592 reverse strand.
BDGP6.32:AE014296.5
This gene has 3 transcripts (splice variants) and 18 orthologues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
mex1-RC | FBtr0334084 | 1034 | 83aa | FBpp0306209 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PFC0 P23487 | NM_001274951 NM_001274951.1 NM_079362.4 NP_001261880 NP_001261880.1 NP_524086.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
mex1-RB | FBtr0303786 | 741 | 83aa | FBpp0292798 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C0PV11 | NM_001202181 NM_001202181.1 NP_001189110 NP_001189110.1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
mex1-RA | FBtr0075602 | 710 | 83aa | FBpp0075355 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PFC0 P23487 | NM_001274951.1 NM_079362 NM_079362.4 NP_001261880.1 NP_524086 NP_524086.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |