Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: Pep FBgn0004401

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Description

Protein on ecdysone puffs

Location

Primary_assembly 3L: 17,638,103-17,645,036 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 71 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pep-RB	FBtr0075199	2792	716aa	FBpp0074963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5AEL0 P41073	NM_001259888.3 NM_080119 NM_080119.6 NM_168742.4 NM_206396.4 NP_001246817.1 NP_524858 NP_524858.1 NP_730290.3 NP_996118.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Pep-RC	FBtr0075200	2691	693aa	FBpp0089253	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NG39	NM_001259888.3 NM_206396 NM_206396.4 NP_001246817.1 NP_996118 NP_996118.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Pep-RD	FBtr0304977	2626	693aa	FBpp0293516	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NG39	NM_001259888 NM_001259888.3 NM_206396.4 NP_001246817 NP_001246817.1 NP_996118.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Pep-RA	FBtr0075198	2446	109aa	FBpp0074962	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_168742 NM_168742.4 NP_730290 NP_730290.3

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Summary

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Gene-based displays