Summary
- Splice variants
- Transcript comparison
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Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Psc FBgn0005624

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Description

Posterior sex combs

Gene Synonyms

Location

Primary_assembly 2R: 12,965,997-12,980,994 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 103 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Psc-RC	FBtr0345375	6332	1601aa	FBpp0311526	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0Z760 P35820	NM_001299439.1 NM_001299440 NM_001299440.1 NM_079001.3 NP_001286368.1 NP_001286369 NP_001286369.1 NP_523725.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Psc-RA	FBtr0087798	6007	1601aa	FBpp0086911	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0Z760 H6QXI9 H6QXK2 P35820 Q9TXC7	NM_001299439.1 NM_001299440.1 NM_079001 NM_079001.3 NP_001286368.1 NP_001286369.1 NP_523725 NP_523725.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Psc-RB	FBtr0345196	5671	1601aa	FBpp0311395	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0Z760 P35820	NM_001299439 NM_001299439.1 NM_001299440.1 NM_079001.3 NP_001286368 NP_001286368.1 NP_001286369.1 NP_523725.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays