Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: Vha55 FBgn0005671

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Description

Vacuolar H[+]-ATPase 55kD subunit

Location

Primary_assembly 3R: 12,623,762-12,627,829 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 122 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Vha55-RB	FBtr0082670	2722	490aa	FBpp0082139	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIJ5 P31409	NM_001170126.1 NM_057560 NM_057560.4 NM_169475.2 NP_001163597.1 NP_476908 NP_476908.1 NP_731726.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Vha55-RA	FBtr0082671	2658	490aa	FBpp0082140	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIJ5 P31409	NM_001170126.1 NM_057560.4 NM_169475 NM_169475.2 NP_001163597.1 NP_476908.1 NP_731726 NP_731726.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Vha55-RC	FBtr0301661	2048	490aa	FBpp0290875	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIJ5 P31409	NM_001170126 NM_001170126.1 NM_057560.4 NM_169475.2 NP_001163597 NP_001163597.1 NP_476908.1 NP_731726.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays