Description
Syndecan
Location
Primary_assembly 2R: 21,392,402-21,481,176 reverse strand.
BDGP6.32:AE013599.5
About this gene
This gene has 9 transcripts (splice variants) and 102 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Sdc-RI | FBtr0342893 | 3982 | 494aa | FBpp0309694 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7YZN0 | NM_001144257 NM_001144257.4 NP_001137729 NP_001137729.2 | APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2 |
| Sdc-RK | FBtr0342895 | 3466 | 322aa | FBpp0309696 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_166450 NP_726072 | APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2 |
| Sdc-RG | FBtr0305897 | 2944 | 75aa | FBpp0297065 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K862 | NM_001259518 NM_001259518.2 NP_001246447 NP_001246447.1 | APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2 |
| Sdc-RJ | FBtr0342894 | 2770 | 495aa | FBpp0309695 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JGQ9 | NM_001169767 NM_001169767.3 NP_001163238 NP_001163238.2 | APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5 |
| Sdc-RA | FBtr0071706 | 2482 | 399aa | FBpp0071623 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P49415 | NM_057617 NM_057617.5 NM_166449.5 NP_476965 NP_476965.1 NP_726071.1 | APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2 |
| Sdc-RL | FBtr0474169 | 2482 | 408aa | FBpp0423168 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4P7VJV5 | NM_001369961 | APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2 |
| Sdc-RH | FBtr0342892 | 2245 | 266aa | FBpp0309693 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4LG79 | NM_001299749 NM_001299749.1 NP_001286678 NP_001286678.1 | APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2 |
| Sdc-RB | FBtr0071707 | 1985 | 226aa | FBpp0071624 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_166449 NM_166449.5 NP_726071 NP_726071.1 | APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2 |
| Sdc-RD | FBtr0273206 | 1869 | 398aa | FBpp0271714 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7YZM9 | NM_001144256 NM_001144256.2 NP_001137728 NP_001137728.1 | APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2 |
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