Spinophilin
Primary_assembly 3L: 2,505,245-2,554,292 reverse strand.
BDGP6.32:AE014296.5
This gene has 11 transcripts (splice variants) and 158 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Spn-RJ | FBtr0304621 | 7376 | 2148aa | FBpp0293163 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NFI9 | NM_001259649 NM_001259649.1 NP_001246578 NP_001246578.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Spn-RC | FBtr0304614 | 10136 | 2134aa | FBpp0293156 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NEY3 | NM_001259641.1 NM_001259642 NM_001259642.1 NM_001259647.1 NP_001246570.1 NP_001246571 NP_001246571.1 NP_001246576.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Spn-RH | FBtr0304619 | 9544 | 2134aa | FBpp0293161 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NEY3 | NM_001259641.1 NM_001259642.1 NM_001259647 NM_001259647.1 NP_001246570.1 NP_001246571.1 NP_001246576 NP_001246576.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Spn-RI | FBtr0304620 | 8756 | 2116aa | FBpp0293162 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NDX8 | NM_001259648 NM_001259648.1 NP_001246577 NP_001246577.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Spn-RD | FBtr0304615 | 7343 | 2137aa | FBpp0293157 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D1Z359 H5V864 Q8MSU5 Q9GQA3 | NM_001259643 NM_001259643.1 NP_001246572 NP_001246572.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Spn-RB | FBtr0304613 | 7334 | 2134aa | FBpp0293155 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NEY3 | NM_001259641 NM_001259641.1 NM_001259642.1 NM_001259647.1 NP_001246570 NP_001246570.1 NP_001246571.1 NP_001246576.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Spn-RG | FBtr0304618 | 7295 | 2121aa | FBpp0293160 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NEY5 | NM_001259646 NM_001259646.1 NP_001246575 NP_001246575.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Spn-RS | FBtr0345046 | 7289 | 2119aa | FBpp0311289 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W003 | NM_080516 NM_080516.3 NP_536777 NP_536777.3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Spn-RF | FBtr0304617 | 6520 | 1684aa | FBpp0293159 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9ND28 | NM_001259645 NM_001259645.1 NP_001246574 NP_001246574.1 | - |
| Spn-RT | FBtr0345047 | 6425 | 1831aa | FBpp0311290 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JC06 | NM_001299992 NM_001299992.1 NP_001286921 NP_001286921.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Spn-RE | FBtr0304616 | 6383 | 1817aa | FBpp0293158 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NFI2 | NM_001259644 NM_001259644.1 NP_001246573 NP_001246573.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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