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DB built by FlyBase

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Gene: CalpA FBgn0012051

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Description

Calpain-A

Gene Synonyms

Location

Primary_assembly 2R: 19,425,113-19,430,564 forward strand.

BDGP6.54:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 69 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CalpA-RD	FBtr0340532	2934	843aa	FBpp0309435	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LG26	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CalpA-RC	FBtr0112869	2889	828aa	FBpp0111782	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYJ3 Q11002	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CalpA-RB	FBtr0086529	2797	828aa	FBpp0085714	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYJ3 Q11002	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CalpA-RA	FBtr0086530	2301	565aa	FBpp0085715	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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