Summary
- Splice variants
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Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: nrv2 FBgn0015777

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Description

nervana 2

Gene Synonyms

Location

Primary_assembly 2L: 6,789,770-6,798,862 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 6 transcripts (splice variants), 125 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
nrv2-RC	FBtr0079381	2668	323aa	FBpp0079009	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0B5 Q24048	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
nrv2-RG	FBtr0332369	2635	323aa	FBpp0304645	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0B5 Q24048	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
nrv2-RD	FBtr0079383	2156	322aa	FBpp0079011	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RL12	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
nrv2-RF	FBtr0100382	2143	323aa	FBpp0099794	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0B5 Q24048	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
nrv2-RA	FBtr0079382	1980	322aa	FBpp0079010	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RL12	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
nrv2-RE	FBtr0100381	1949	322aa	FBpp0099793	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RL12	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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