Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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DB built by FlyBase

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Gene: RtGEF FBgn0015803

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Description

Rho-type guanine nucleotide exchange factor

Gene Synonyms

Location

Primary_assembly 2L: 20,350,434-20,365,254 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 8 transcripts (splice variants), 66 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
RtGEF-RF	FBtr0336747	5284	1310aa	FBpp0307723	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ19	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
RtGEF-RI	FBtr0479856	4943	1310aa	FBpp0428192	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VED8 A8DZ19	-	-
RtGEF-RH	FBtr0336749	4343	1198aa	FBpp0307725	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBE8	-	-
RtGEF-RD	FBtr0112885	4194	973aa	FBpp0111798	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEJ2 A8DZ20	-	-
RtGEF-RG	FBtr0336748	3938	923aa	FBpp0307724	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGB1	-	-
RtGEF-RA	FBtr0081356	3336	687aa	FBpp0080888	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIN1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
RtGEF-RE	FBtr0302106	2995	635aa	FBpp0291316	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C3KGL5	-	-
RtGEF-RB	FBtr0081357	2976	687aa	FBpp0080889	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O62527 Q8SYV1 Q9VIN1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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