Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: side FBgn0016061

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Description

sidestep

Gene Synonyms

Location

Primary_assembly 3R: 27,375,088-27,437,482 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 155 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
side-RC	FBtr0309179	5059	986aa	FBpp0301133	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7N1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
side-RB	FBtr0289998	11301	929aa	FBpp0288437	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0R1 E0R977 F5XVG8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
side-RD	FBtr0309180	6074	943aa	FBpp0301134	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6K0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
side-RA	FBtr0085168	5651	939aa	FBpp0084538	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5XVG8 Q967X6 Q9VB35	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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