Focal adhesion kinase
Primary_assembly 2R: 19,430,659-19,437,259 reverse strand.
BDGP6.32:AE013599.5
This gene has 6 transcripts (splice variants), 147 orthologues and 11 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Fak-RD | FBtr0114605 | 5613 | 1500aa | FBpp0113097 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7YZL9 Q2TGI0 | NM_001144246 NM_001144246.3 NP_001137718 NP_001137718.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Fak-RA | FBtr0086542 | 4713 | 1200aa | FBpp0085726 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0E917 | NM_001144247.3 NM_079069 NM_079069.4 NM_166352.3 NM_166353.3 NP_001137719.2 NP_523793 NP_523793.2 NP_725891.1 NP_725892.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Fak-RF | FBtr0301882 | 4707 | 1198aa | FBpp0291096 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JGM8 Q9U5Y2 | NM_001169736 NM_001169736.2 NP_001163207 NP_001163207.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Fak-RB | FBtr0086543 | 4499 | 1200aa | FBpp0085727 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0E917 | NM_001144247.3 NM_079069.4 NM_166352 NM_166352.3 NM_166353.3 NP_001137719.2 NP_523793.2 NP_725891 NP_725891.1 NP_725892.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Fak-RC | FBtr0086544 | 4240 | 1200aa | FBpp0085728 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B8A418 Q0E917 Q5BIG9 Q9U472 Q9U531 | NM_001144247.3 NM_079069.4 NM_166352.3 NM_166353 NM_166353.3 NP_001137719.2 NP_523793.2 NP_725891.1 NP_725892 NP_725892.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Fak-RG | FBtr0301883 | 4142 | 1200aa | FBpp0291097 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0E917 | NM_001144247 NM_001144247.3 NM_079069.4 NM_166352.3 NM_166353.3 NP_001137719 NP_001137719.2 NP_523793.2 NP_725891.1 NP_725892.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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