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- Splice variants
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DB built by FlyBase

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Gene: melt FBgn0023001

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Description

melted

Gene Synonyms

Location

Primary_assembly 3L: 7,134,516-7,143,074 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 150 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
melt-RC	FBtr0302044	4086	994aa	FBpp0291254	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VS24	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
melt-RD	FBtr0333373	4366	992aa	FBpp0305565	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PEK0 Q6NNU9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
melt-RB	FBtr0100141	4068	988aa	FBpp0099491	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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