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- Splice variants
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DB built by FlyBase

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Gene: melt FBgn0023001

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Description

melted

Gene Synonyms

Location

Primary_assembly 3L: 7,134,516-7,143,074 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 57 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
melt-RC	FBtr0302044	4086	994aa	FBpp0291254	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VS24	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
melt-RD	FBtr0333373	4366	992aa	FBpp0305565	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PEK0 Q6NNU9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
melt-RB	FBtr0100141	4068	988aa	FBpp0099491	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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