Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
- Variant image
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Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG3078 FBgn0023524

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Location

Primary_assembly X: 2,254,403-2,259,863 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 91 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG3078-RB	FBtr0340208	3982	744aa	FBpp0309183	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O46076 X2JDK7	NM_001297888 NM_001297888.1 NP_001284817 NP_001284817.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG3078-RA	FBtr0070415	3979	743aa	FBpp0070399	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W502	NM_130635 NM_130635.3 NP_569991 NP_569991.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG3078-RC	FBtr0474141	3979	749aa	FBpp0423140	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4D6K262 Q8SXC8	NM_001369995	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG3078-RD	FBtr0474238	3979	765aa	FBpp0423191	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4D6K3U9	NM_001369996	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5

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Summary

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Gene-based displays