GluClalpha
Primary_assembly 3R: 19,730,715-19,775,231 forward strand.
BDGP6.32:AE014297.3
This gene has 11 transcripts (splice variants), 140 orthologues and 21 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| GluClalpha-RN | FBtr0343788 | 2569 | 463aa | FBpp0310353 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4LID6 | NM_001014641.4 NM_001038972.4 NM_001300479 NM_001300479.1 NM_142570.4 NM_169873.4 NP_001287408 NP_001287408.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| GluClalpha-RJ | FBtr0335418 | 5661 | 457aa | FBpp0307401 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KHS0 | NM_001014641.4 NM_001038972.4 NM_001275811 NM_001275811.2 NM_142570.4 NM_169873.4 NP_001262740 NP_001262740.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| GluClalpha-RI | FBtr0335417 | 5658 | 456aa | FBpp0307400 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_001014641.4 NM_001038972.4 NM_142570.4 NM_169873 NM_169873.4 NP_732447 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| GluClalpha-RM | FBtr0335421 | 5658 | 456aa | FBpp0307404 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q94900 | NM_001014641.4 NM_001038972.4 NM_142570 NM_142570.4 NM_169873.4 NP_650827 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| GluClalpha-RO | FBtr0343789 | 5655 | 455aa | FBpp0310354 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4LHB7 | NM_001014641.4 NM_001038972.4 NM_001300480 NM_001300480.1 NM_142570.4 NM_169873.4 NP_001287409 NP_001287409.1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| GluClalpha-RP | FBtr0343790 | 2548 | 456aa | FBpp0310355 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4LHB9 | NM_001014641.4 NM_001038972.4 NM_001300481 NM_001300481.1 NM_142570.4 NM_169873.4 NP_001287410 NP_001287410.1 | - |
| GluClalpha-RL | FBtr0335420 | 2524 | 448aa | FBpp0307403 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_001014641 NM_001014641.4 NM_001038972.4 NM_142570.4 NM_169873.4 NP_001014641 | - |
| GluClalpha-RK | FBtr0335419 | 2521 | 447aa | FBpp0307402 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JIQ1 | NM_001014641.4 NM_001038972.4 NM_001170185 NM_001170185.3 NM_142570.4 NM_169873.4 NP_001163656 NP_001163656.2 | - |
| GluClalpha-RH | FBtr0335416 | 2521 | 447aa | FBpp0307399 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_001014641.4 NM_001038972 NM_001038972.4 NM_142570.4 NM_169873.4 NP_001034061 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| GluClalpha-RF | FBtr0301379 | 1770 | 349aa | FBpp0290593 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JIQ2 | NM_001014641.4 NM_001038972.4 NM_001170184 NM_001170184.2 NM_142570.4 NM_169873.4 NP_001163655 NP_001163655.1 | - |
| GluClalpha-RE | FBtr0301378 | 1650 | 263aa | FBpp0290592 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0IGX3 | NM_001014641.4 NM_001038972.4 NM_001170183 NM_001170183.2 NM_142570.4 NM_169873.4 NP_001163654 NP_001163654.1 | - |
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