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DB built by FlyBase

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Gene: GluClalpha FBgn0024963

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Description

GluClalpha

Gene Synonyms

Location

Primary_assembly 3R: 19,730,715-19,775,231 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 11 transcripts (splice variants), 206 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
GluClalpha-RN	FBtr0343788	2569	463aa	FBpp0310353	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LID6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
GluClalpha-RJ	FBtr0335418	5661	457aa	FBpp0307401	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHS0	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
GluClalpha-RI	FBtr0335417	5658	456aa	FBpp0307400	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
GluClalpha-RM	FBtr0335421	5658	456aa	FBpp0307404	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q94900	-	-
GluClalpha-RO	FBtr0343789	5655	455aa	FBpp0310354	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHB7	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
GluClalpha-RP	FBtr0343790	2548	456aa	FBpp0310355	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHB9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
GluClalpha-RL	FBtr0335420	2524	448aa	FBpp0307403	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
GluClalpha-RK	FBtr0335419	2521	447aa	FBpp0307402	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIQ1	-	-
GluClalpha-RH	FBtr0335416	2521	447aa	FBpp0307399	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
GluClalpha-RF	FBtr0301379	1770	349aa	FBpp0290593	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIQ2	-	-
GluClalpha-RE	FBtr0301378	1650	263aa	FBpp0290592	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0IGX3	-	-

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Summary

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