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DB built by FlyBase

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Gene: CkIIalpha-i3 FBgn0025676

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Description

CKII-alpha subunit interactor-3

Gene Synonyms

Location

Primary_assembly 3L: 708,601-710,607 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CkIIalpha-i3-RB	FBtr0072604	1289	391aa	FBpp0072500	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRI7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CkIIalpha-i3-RC	FBtr0346537	1540	387aa	FBpp0312155	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O77228 Q9W0N3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CkIIalpha-i3-RA	FBtr0072603	1275	387aa	FBpp0072499	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0N3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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