Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: eIF1A FBgn0026250

.

Description

eukaryotic translation initiation factor 1A

Gene Synonyms

Location

Primary_assembly 3R: 18,274,665-18,283,005 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 142 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
eIF1A-RC	FBtr0343927	1646	148aa	FBpp0310418	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NJB4 Q9VEA1	NM_001300457 NM_001300457.1 NM_079989.2 NM_206509.1 NP_001287386 NP_001287386.1 NP_524728.2 NP_996231.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
eIF1A-RB	FBtr0083573	1199	148aa	FBpp0089421	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VEA1	NM_001300457.1 NM_079989.2 NM_206509 NM_206509.1 NP_001287386.1 NP_524728.2 NP_996231 NP_996231.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
eIF1A-RA	FBtr0083572	1158	148aa	FBpp0082994	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VEA1	NM_001300457.1 NM_079989 NM_079989.2 NM_206509.1 NP_001287386.1 NP_524728 NP_524728.2 NP_996231.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.

Gene-based displays