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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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DB built by FlyBase

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Gene: bip1 FBgn0026263

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Description

bip1

Gene Synonyms

Location

Primary_assembly 3L: 8,054,333-8,058,713 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 2 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
bip1-RA	FBtr0076745	1825	419aa	FBpp0076462	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T9I2 Q9V457 Q9XZU6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
bip1-RB	FBtr0302329	1472	327aa	FBpp0291535	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6SV53	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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