Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: Axn FBgn0026597

.

Description

Axin

Gene Synonyms

Location

Primary_assembly 3R: 30,022,842-30,035,311 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 7 transcripts (splice variants), 42 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Axn-RA	FBtr0085553	4691	745aa	FBpp0084919	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V3M5 Q9V407	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Axn-RD	FBtr0290030	4553	699aa	FBpp0288469	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0S0 C3KGN7 Q6NNF0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Axn-RF	FBtr0334702	4535	693aa	FBpp0306757	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHW0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Axn-RC	FBtr0085554	4281	739aa	FBpp0084920	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMJ7 Q8T022	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Axn-RB	FBtr0085555	3638	745aa	FBpp0084921	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V3M5 Q9V407	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Axn-RG	FBtr0334703	3620	739aa	FBpp0306758	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMJ7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Axn-RE	FBtr0300600	3578	110aa	FBpp0289827	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJ18	-	-

.

Summary

.

.