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- Splice variants
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DB built by FlyBase

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Gene: ThrRS FBgn0027081

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Description

Threonyl-tRNA synthetase

Gene Synonyms

Location

Primary_assembly 2L: 12,103,751-12,107,170 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 150 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ThrRS-RD	FBtr0346436	2796	747aa	FBpp0312095	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VKB0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ThrRS-RA	FBtr0080332	2520	747aa	FBpp0079914	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGC5 Q8MRL7 Q9VKB0	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ThrRS-RC	FBtr0080333	2314	690aa	FBpp0079915	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IP94	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ThrRS-RB	FBtr0080331	2298	690aa	FBpp0079913	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IP94	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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