Rab11 interacting protein
Primary_assembly X: 18,635,642-18,647,648 reverse strand.
BDGP6.32:AE014298.5
This gene has 5 transcripts (splice variants) and 103 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Rip11-RA | FBtr0074616 | 3808 | 832aa | FBpp0074387 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95SD9 Q9VWS3 | NM_133085 NM_133085.4 NP_573313 NP_573313.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Rip11-RD | FBtr0343020 | 3726 | 826aa | FBpp0309772 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JL40 | NM_001298483 NM_001298483.1 NP_001285412 NP_001285412.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Rip11-RE | FBtr0343021 | 3466 | 815aa | FBpp0309773 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JFP6 | NM_001298484 NM_001298484.1 NP_001285413 NP_001285413.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Rip11-RC | FBtr0343019 | 2508 | 420aa | FBpp0309771 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JEA7 | NM_001298482 NM_001298482.1 NP_001285411 NP_001285411.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Rip11-RB | FBtr0301545 | 2329 | 409aa | FBpp0290760 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q494I2 | NM_001169320 NM_001169320.2 NP_001162791 NP_001162791.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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