Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: RecQ5 FBgn0027375

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Description

RecQ5 helicase

Gene Synonyms

Location

Primary_assembly 3L: 14,628,160-14,632,077 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 161 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
RecQ5-RB	FBtr0075715	3412	1058aa	FBpp0075458	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DN71 Q95U81 Q9U5E0 Q9UA31 Q9UA32 Q9V433 Q9Y1H2 R4NTS1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
RecQ5-RA	FBtr0075714	3739	470aa	FBpp0075457	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZ98	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
RecQ5-RC	FBtr0100362	3664	468aa	FBpp0099768	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q59E27	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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