Primary_assembly X: 16,913,180-16,938,209 forward strand.
BDGP6.32:AE014298.5
This gene has 3 transcripts (splice variants), 174 orthologues and 2 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| CG4928-RA | FBtr0074344 | 3472 | 538aa | FBpp0074118 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z155 Q9Y115 | NM_132951.3 NM_167552 NM_167552.2 NP_573179.1 NP_728035 NP_728035.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG4928-RB | FBtr0074345 | 3410 | 538aa | FBpp0074119 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z155 Q9Y115 | NM_132951 NM_132951.3 NM_167552.2 NP_573179 NP_573179.1 NP_728035.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG4928-RC | FBtr0342973 | 1772 | 495aa | FBpp0309738 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JFT8 | NM_001298425 NM_001298425.1 NP_001285354 NP_001285354.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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