Primary_assembly X: 3,868,973-3,880,379 forward strand.
BDGP6.32:AE014298.5
This gene has 5 transcripts (splice variants), 139 orthologues and 2 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| CG2930-RE | FBtr0340201 | 2683 | 815aa | FBpp0309176 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JCG8 | NM_001297916 NM_001297916.1 NP_001284845 NP_001284845.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG2930-RF | FBtr0340202 | 3701 | 810aa | FBpp0309177 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3PFE3 Q9U4G9 Q9W4P6 | NM_001297917 NM_001297917.1 NM_176683.3 NM_176684.3 NP_001284846 NP_001284846.1 NP_788856.1 NP_788857.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CG2930-RB | FBtr0070610 | 2818 | 810aa | FBpp0070583 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W4P6 | NM_001297917.1 NM_176683.3 NM_176684 NM_176684.3 NP_001284846.1 NP_788856.1 NP_788857 NP_788857.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CG2930-RA | FBtr0070609 | 2773 | 810aa | FBpp0070582 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W4P6 | NM_001297917.1 NM_176683 NM_176683.3 NM_176684.3 NP_001284846.1 NP_788856 NP_788856.1 NP_788857.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CG2930-RD | FBtr0070608 | 2703 | 803aa | FBpp0070581 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IRT1 | NM_176682 NM_176682.2 NP_788855 NP_788855.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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