Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: Rpn2 FBgn0028692

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Description

Regulatory particle non-ATPase 2

Gene Synonyms

Location

Primary_assembly 3R: 29,153,524-29,157,255 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 206 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Rpn2-RB	FBtr0330379	3325	1029aa	FBpp0303405	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KI10	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Rpn2-RC	FBtr0334532	3412	1020aa	FBpp0306599	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHE9 Q9V3P6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Rpn2-RA	FBtr0085385	3325	1020aa	FBpp0084754	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHE9 Q9V3P6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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