Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: slmo FBgn0029161

.

Location

Chromosome 2L: 6,046,516-6,048,706 reverse strand.

BDGP6.28:AE014134.6

About this gene

This gene has 5 transcripts (splice variants), 108 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0299810	2056	215aa	FBpp0289088	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0A1 Q9V3U9	NM_001103624.2 NM_001144321.2 NM_001298724.1 NM_079966.3 NM_164677.2 NP_001097094.1 NP_001137793.1 NP_001285653.1 NP_524705.1 NP_723148.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0112945	1703	215aa	FBpp0111858	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0A1 Q9V3U9	NM_001103624.2 NM_001144321.2 NM_001298724.1 NM_079966.3 NM_164677.2 NP_001097094.1 NP_001137793.1 NP_001285653.1 NP_524705.1 NP_723148.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0343130	1419	215aa	FBpp0309829	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0A1 Q9V3U9	NM_001103624.2 NM_001144321.2 NM_001298724.1 NM_079966.3 NM_164677.2 NP_001097094.1 NP_001137793.1 NP_001285653.1 NP_524705.1 NP_723148.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0079217	1281	215aa	FBpp0078848	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0A1 Q9V3U9	NM_001103624.2 NM_001144321.2 NM_001298724.1 NM_079966.3 NM_164677.2 NP_001097094.1 NP_001137793.1 NP_001285653.1 NP_524705.1 NP_723148.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0079218	1162	215aa	FBpp0078849	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0A1 Q9V3U9	NM_001103624.2 NM_001144321.2 NM_001298724.1 NM_079966.3 NM_164677.2 NP_001097094.1 NP_001137793.1 NP_001285653.1 NP_524705.1 NP_723148.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

.

Summary

.

.

Gene-based displays