Summary
- Splice variants
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DB built by FlyBase

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Gene: CG12075 FBgn0030065

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Gene Synonyms

Location

Primary_assembly X: 8,838,323-8,872,774 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 5 transcripts (splice variants) and 38 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG12075-RE	FBtr0335035	4590	1006aa	FBpp0307041	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3B8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG12075-RB	FBtr0071254	4195	1006aa	FBpp0071197	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3B8	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG12075-RC	FBtr0307271	4192	1006aa	FBpp0298272	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3B8	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG12075-RD	FBtr0335034	4159	994aa	FBpp0307040	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YK55 A9YK57 A9YK59 A9YK65 F6J4R1 F6J4R3 F6J4R4 F6JBW3 M9PE29	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG12075-RA	FBtr0071253	3532	1006aa	FBpp0071196	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6JBW8 Q7K0Y2 Q9W3B8	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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