Summary
- Splice variants
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DB built by FlyBase

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Gene: AP-1gamma FBgn0030089

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Description

Adaptor Protein complex 1, gamma subunit

Gene Synonyms

Location

Primary_assembly X: 9,108,691-9,117,744 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 9 transcripts (splice variants), 183 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AP-1gamma-RD	FBtr0071296	4666	982aa	FBpp0071232	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVR8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
AP-1gamma-RH	FBtr0309255	4997	969aa	FBpp0301194	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86B59	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AP-1gamma-RF	FBtr0112965	4974	963aa	FBpp0111878	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W388	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AP-1gamma-RI	FBtr0333808	4887	963aa	FBpp0305942	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W388	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AP-1gamma-RC	FBtr0071297	4761	969aa	FBpp0071233	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86B59	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AP-1gamma-RA	FBtr0071295	4743	963aa	FBpp0071231	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W388	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AP-1gamma-RG	FBtr0309254	4718	963aa	FBpp0301193	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W388	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AP-1gamma-RE	FBtr0071298	4681	963aa	FBpp0089134	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W388	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AP-1gamma-RB	FBtr0071294	4648	976aa	FBpp0071230	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q494L9 Q7KVR7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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