Adaptor Protein complex 1, gamma subunit
Primary_assembly X: 9,108,691-9,117,744 forward strand.
BDGP6.32:AE014298.5
This gene has 9 transcripts (splice variants), 132 orthologues and 1 paralogue.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| AP-1gamma-RD | FBtr0071296 | 4666 | 982aa | FBpp0071232 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KVR8 | NM_176718 NM_176718.4 NP_788891 NP_788891.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| AP-1gamma-RH | FBtr0309255 | 4997 | 969aa | FBpp0301194 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86B59 | NM_001258661 NM_001258661.2 NM_176717.4 NP_001245590 NP_001245590.1 NP_788890.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| AP-1gamma-RF | FBtr0112965 | 4974 | 963aa | FBpp0111878 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W388 | NM_001103448 NM_001103448.3 NM_001258660.1 NM_001272442.1 NM_132299.6 NM_206671.4 NP_001096918 NP_001096918.1 NP_001245589.1 NP_001259371.1 NP_572527.2 NP_996394.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| AP-1gamma-RI | FBtr0333808 | 4887 | 963aa | FBpp0305942 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W388 | NM_001103448.3 NM_001258660.1 NM_001272442 NM_001272442.1 NM_132299.6 NM_206671.4 NP_001096918.1 NP_001245589.1 NP_001259371 NP_001259371.1 NP_572527.2 NP_996394.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| AP-1gamma-RC | FBtr0071297 | 4761 | 969aa | FBpp0071233 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86B59 | NM_001258661.2 NM_176717 NM_176717.4 NP_001245590.1 NP_788890 NP_788890.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| AP-1gamma-RA | FBtr0071295 | 4743 | 963aa | FBpp0071231 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W388 | NM_001103448.3 NM_001258660.1 NM_001272442.1 NM_132299 NM_132299.6 NM_206671.4 NP_001096918.1 NP_001245589.1 NP_001259371.1 NP_572527 NP_572527.2 NP_996394.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| AP-1gamma-RG | FBtr0309254 | 4718 | 963aa | FBpp0301193 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W388 | NM_001103448.3 NM_001258660 NM_001258660.1 NM_001272442.1 NM_132299.6 NM_206671.4 NP_001096918.1 NP_001245589 NP_001245589.1 NP_001259371.1 NP_572527.2 NP_996394.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| AP-1gamma-RE | FBtr0071298 | 4681 | 963aa | FBpp0089134 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W388 | NM_001103448.3 NM_001258660.1 NM_001272442.1 NM_132299.6 NM_206671 NM_206671.4 NP_001096918.1 NP_001245589.1 NP_001259371.1 NP_572527.2 NP_996394 NP_996394.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| AP-1gamma-RB | FBtr0071294 | 4648 | 976aa | FBpp0071230 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q494L9 Q7KVR7 | NM_167178 NM_167178.5 NP_727311 NP_727311.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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