Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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Genetic Variation
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DB built by FlyBase

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Gene: CG2990 FBgn0030170

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Location

Primary_assembly X: 10,010,481-10,014,279 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 2 transcripts (splice variants), 128 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG2990-RB	FBtr0071415	3683	1100aa	FBpp0071350	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86D36 Q8IRL9	NM_167214 NM_167214.2 NP_727386 NP_727386.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG2990-RC	FBtr0112971	3680	1099aa	FBpp0111884	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E8NH96 Q9W2Z4	NM_001103463 NM_001103463.2 NP_001096933 NP_001096933.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays