Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: PGRP-SA FBgn0030310

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Description

Peptidoglycan recognition protein SA

Gene Synonyms

Location

Primary_assembly X: 11,561,643-11,562,779 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 2 transcripts (splice variants), 81 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PGRP-SA-RA	FBtr0073509	1018	203aa	FBpp0073358	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J5S6 F6J5T4 F6J5U5 Q9VYX7 X2JEI8	NM_001298199.1 NM_132499 NM_132499.3 NP_001285128.1 NP_572727 NP_572727.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
PGRP-SA-RB	FBtr0340296	726	203aa	FBpp0309257	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYX7 X2JEI8	NM_001298199 NM_001298199.1 NM_132499.3 NP_001285128 NP_001285128.1 NP_572727.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays